BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D02LP1|AL426349
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 1561 0.0
>3x_Contig1674
Length = 12281
Score = 1561 bits (787), Expect = 0.0
Identities = 794/797 (99%)
Strand = Plus / Minus
Query: 1 gatcaaactgtccttacctagctttcaaaaataaaccagagtctatcggtggtaatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4016 gatcaaactgtccttacctagctttcaaaaataaaccagagtctatcggtggtaatgcaa 3957
Query: 61 attggtgcctaactatggtaaaaatagcacgttaaaaaaaaagaatctggtatgaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3956 attggtgcctaactatggtaaaaatagcacgttaaaaaaaaagaatctggtatgaagtga 3897
Query: 121 gcgctcaatattgattgtacaaaagtaacttttgtggcaggtaaataacacgttagaact 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3896 gccctcaatattgattgtacaaaagtaacttttgtggcaggtaaataacacgttagaact 3837
Query: 181 atctcaaaagccttttaaaatctttggatcacccgctctaaatactttcaagcatctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3836 atctcaaaagccttttaaaatctttggatcacccgctctaaatactttcaagcatctgaa 3777
Query: 241 ttcatgtattatcttatgaaatgtttctgtccatcggtatgttattcctgtcgaaatcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3776 ttcatgtattatcttatgaaatgtttctgtccatcggtatgttattcctgtcgaaatcgt 3717
Query: 301 cgactttcagaaagggaaacttgtaagttcttacaatcacgtgatatgacttaatggaat 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3716 cgactttcagaaagggaaacttgaaagttcttacaatcacgtgatatgacttaatggaat 3657
Query: 361 gtgtcaatcccccacacaccaattggtccgtcgataatcgaattgcaagctaaatataac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3656 gtgtcaatcccccacacaccaattggtccgtcgataatcgaattgcaagctaaatataac 3597
Query: 421 atatttcaggatattaacttcctatggtatgtgtgttatatagattgtctacgaratgaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3596 atatttcaggatattaacttcctatggtatgtgtgttatatagattgtctacgaaatgaa 3537
Query: 481 atgacatttaaatgaagtggattcttcttaacaataaaacggttactttcaacaaggtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3536 atgacatttaaatgaagtggattcttcttaacaataaaacggttactttcaacaaggtga 3477
Query: 541 tatcatggaatactgggacagtggcccatcttgagctaaggatcctttcagccacttcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3476 tatcatggaatactgggacagtggcccatcttgagctaaggatcctttcagccacttcga 3417
Query: 601 atacccgaagtctaaggtatagtctaaaaccttcagagctattgaaaattggcggtacaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3416 atacccgaagtctaaggtatagtctaaaaccttcagagctattgaaaattggcggtacaa 3357
Query: 661 acggcactgctttccgaatgtactcatctcgaattgacactgaagctaccggatcatcaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3356 acggcactgctttccgaatgtactcatctcgaattgacactgaagctaccggatcatcaa 3297
Query: 721 cgataatcccggtaatggtcatactactgatatatttgatgtcaatttcggaattgacgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3296 cgataatcccggtaatggtcatactactgatatatttgatgtcaatttcggaattgacgg 3237
Query: 781 tccaaaggtatacggca 797
|||||||||||||||||
Sbjct: 3236 tccaaaggtatacggca 3220
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6607
Number of Sequences: 1807
Number of extensions: 6607
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)